SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes:

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 17
Number of Genes: 0

Export to: CSV
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View mm170241ct 17 rs59101374,rs796223789
dbSNP
78064247 346.73 CA C . 0/1 13 MOTIF[MA0058.1:Max] LOW 0.55811 0.55810 None None None None None None None
View mm170241ct 17 rs116948275
dbSNP
58469488 71.78 G A . 0/1 4 MOTIF[MA0058.1:Max] MODIFIER 0.01937 0.01937 None None None None None None None
View mm170241ct 16 rs59820570
dbSNP
83984486 225.8 G A . 1/1 11 MOTIF[MA0058.1:Max] LOW 0.67213 0.67210 None None None None None None None
View mm170241ct 16 rs57653517
dbSNP
83983920 143.9 G A . 1/1 5 MOTIF[MA0058.1:Max] LOW 0.72883 0.72880 None None None None None None None
View mm170241ct 16 rs72523665
dbSNP
69951847 179.73 C CCT . 0/1 15 MOTIF[MA0058.1:Max] LOW 0.72644 0.72640 None None None None None None None
View mm170241ct 16 rs11646653
dbSNP
28922149 450.77 C T . 0/1 38 MOTIF[MA0058.1:Max] LOW 0.75499 0.75500 None None None None None None None
View mm170241ct 11 rs769440
dbSNP
64889416 266.77 G C . 0/1 15 MOTIF[MA0058.1:Max] MODIFIER 0.44868 0.44870 None None None None None None None
View mm170241ct 8 rs4475500
dbSNP
144660523 209.84 A G . 1/1 8 MOTIF[MA0058.1:Max] MODIFIER 1.00000 1.00000 None None None None None None None
View mm170241ct 8 rs2250895
dbSNP
145692296 1007.77 A C . 1/1 32 MOTIF[MA0058.1:Max] MODIFIER 0.93730 0.93730 0.00952 None None None None None None None
View mm170241ct 6 rs1713862
dbSNP
74171467 287.78 C G . 1/1 9 MOTIF[MA0058.1:Max] LOW 0.91134 0.91130 None None None None None None None
View mm170241ct 6 rs3828916
dbSNP
31465915 667.77 G C . 1/1 25 MOTIF[MA0058.1:Max] LOW 0.85064 0.85060 None None None None None None None
View mm170241ct 5 rs2973727
dbSNP
177658945 82.28 C T . 1/1 3 MOTIF[MA0058.1:Max] MODIFIER 0.92252 0.92250 None None None None None None None
View mm170241ct 5 rs226198
dbSNP
81573992 252.78 C T . 1/1 8 MOTIF[MA0058.1:Max] LOW 0.89896 0.89900 None None None None None None None
View mm170241ct 1 rs2253831
dbSNP
237923053 1858.77 C T . 0/1 110 MOTIF[MA0058.1:Max] LOW 0.76158 0.76160 0.27402 None None None None None None None
View mm170241ct 1 rs75087057
dbSNP
159796430 100.77 G A . 0/1 9 MOTIF[MA0058.1:Max] MODIFIER 0.02356 0.02356 None None None None None None None
View mm170241ct 1 rs17374048
dbSNP
84945339 54.77 C T . 0/1 10 MOTIF[MA0058.1:Max] MODIFIER 0.03075 0.03075 None None None None None None None
View mm170241ct 1 rs3120045
dbSNP
43697968 754.77 G A . 1/1 20 MOTIF[MA0058.1:Max] LOW 0.46745 0.46750 None None None None None None None