SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes:

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 6
Number of Genes: 0

Export to: CSV
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View mm170241ct 20 rs7266947
dbSNP
26188912 18443.77 A C . 0/1 676 MOTIF[MA0062.1:Gabp] LOW None None None None None None None
View mm170241ct 19 rs11085837
dbSNP
13345526 50.74 G A . 1/1 2 MOTIF[MA0062.1:Gabp] LOW 0.36462 0.36460 None None None None None None None
View mm170241ct 11 rs11217125
dbSNP
118889185 105.77 T C . 0/1 14 MOTIF[MA0062.1:Gabp] MODIFIER 0.27077 0.27080 None None None None None None None
View mm170241ct 8 rs114412309
dbSNP
29952925 105.77 C T . 0/1 14 MOTIF[MA0062.1:Gabp] LOW 0.00639 0.00639 None None None None None None None
View mm170241ct 6 rs57174507
dbSNP
90348480 174.73 T TG . 0/1 25 MOTIF[MA0062.1:Gabp] LOW 0.16474 0.16470 0.17926 None None None None None None None
View mm170241ct 1 rs2501078
dbSNP
225117561 22.79 T C LowQual 0/1 9 MOTIF[MA0062.1:Gabp] MODIFIER 0.29373 0.29370 None None None None None None None