SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes at Omim

FANCE,
FANCE Fanconi anemia, complementation group E, 600901 (3)

Genes at Clinical Genomics Database

FANCE,
FANCE Fanconi anemia, complementation group E

Genes at HGMD

Summary

Number of Variants: 19
Number of Genes: 1

Export to: CSV

FANCE

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View pc751_s1 6 rs3823434
dbSNP
35426175 554.83 C T PASS 0/1 62 SYNONYMOUS_CODING LOW SILENT 0.05831 0.05831 0.01784 None None None None None None None
View pc751_s1 6 rs4713867
dbSNP
35423662 1582.63 A C PASS 0/1 166 SYNONYMOUS_CODING LOW SILENT 0.77796 0.77800 0.26434 None None None None None None None
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View pc751_s1 6 rs2046210
dbSNP
151948366 998.91 G A PASS 0/1 98 None None None 0.41214 0.41210 None None None None None None None
View pc751_s1 6 rs9485372
dbSNP
149608874 519.35 G A PASS 0/1 55 None None None 0.24082 0.24080 None None None None None None None
View pc751_s1 6 rs2180341
dbSNP
127600630 2249.94 G A PASS 1/1 83 None None None 0.71046 0.71050 None None None None None None None
View pc751_s1 6 rs9352613
dbSNP
79424433 687.12 A G PASS 0/1 91 None None None 0.29732 0.29730 0.28501 None None None None None None None
View pc751_s1 6 rs1321311
dbSNP
36622900 892.51 C A PASS 0/1 85 None None None 0.27636 0.27640 None None None None None None None
View pc751_s1 6 rs674313
dbSNP
32578082 1160.95 C T PASS 0/1 133 None None None 0.30471 0.30470 None None None None None None None
View pc751_s1 6 rs9268542
dbSNP
32384721 583.53 A G PASS 0/1 67 None None None 0.36661 0.36660 None None None None None None None
View pc751_s1 6 rs2248462
dbSNP
31446796 871.09 G A PASS 0/1 79 None None None 0.20447 0.20450 None None None None None None None
View pc751_s1 6 rs2596542
dbSNP
31366595 1482.28 C T PASS 0/1 126 None None None 0.42153 0.42150 None None None None None None None
View pc751_s1 6 rs2894207
dbSNP
31263751 320.43 T C PASS 0/1 40 None None None 0.22684 0.22680 None None None None None None None
View pc751_s1 6 rs6457327
dbSNP
31074030 1362.88 A C PASS 1/1 56 None None None 0.68251 0.68250 None None None None None None None
View pc751_s1 6 rs2517713
dbSNP
29918099 732.68 G T PASS 0/1 89 None None None 0.67572 0.67570 None None None None None None None
View pc751_s1 6 rs2860580
dbSNP
29906691 976.5 A G PASS 0/1 92 None None None 0.00339 0.00340 None None None None None None None
View pc751_s1 6 rs6939340
dbSNP
22140004 1700.52 A G PASS 1/1 71 None None None 0.69209 0.69210 None None None None None None None
View pc751_s1 6 rs651164
dbSNP
160581374 968.57 A G PASS 0/1 89 None None None 0.63099 0.63100 None None None None None None None
View pc751_s1 6 rs4712653
dbSNP
22125964 2142.57 T C PASS 1/1 90 None None None 0.69788 0.69790 None None None None None None None
View pc751_s1 6 rs685449
dbSNP
153344531 1118.0 T A PASS 0/1 92 None None None 0.46765 0.46770 0.41629 None None None None None None None