+ Filter Options

SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
 GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
 EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
 CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP 		READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP 		ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE 		POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE 		MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
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+ Genes 1

Genes:
KIR3DL2,

+ Genes associated with diseases

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 20
Number of Genes: 1

Export to: CSV

KIR3DL2
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View hp37_1_filt_10x 19 rs3745902
dbSNP		 55378008 521.77 C T PASS 0/1 65 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.26198 0.26200 0.24166 0.10 0.90 None None None None None None None
View hp37_1_filt_10x 19 rs372092512
dbSNP		 55377988 69.77 A T PASS 0/1 63 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.42 0.01 None None None None None None None
View hp37_1_filt_10x 19 . 55377875 181.77 C G PASS 0/1 33 NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION MODERATE MISSENSE 1.00 0.00 4.80 None None None None None None None
View hp37_1_filt_10x 19 . 55377871 207.77 T C PASS 0/1 34 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View hp37_1_filt_10x 19 . 55377853 177.77 G C PASS 0/1 34 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View hp37_1_filt_10x 19 rs150217832
dbSNP		 55377348 342.77 G C PASS 0/1 51 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.04 0.18 None None None None None None None
View hp37_1_filt_10x 19 rs138402445
dbSNP		 55377343 346.77 C T PASS 0/1 56 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.06 0.01 None None None None None None None
View hp37_1_filt_10x 19 rs2915987
dbSNP		 55377340 380.77 T C PASS 0/1 56 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.94 0.00 None None None None None None None
View hp37_1_filt_10x 19 . 55377325 368.77 C T PASS 0/1 55 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.22 0.03 None None None None None None None
View hp37_1_filt_10x 19 . 55377319 272.77 C A PASS 0/1 56 NON_SYNONYMOUS_CODING MODERATE MISSENSE 1.00 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs2915986
dbSNP		 55377307 226.77 T A PASS 0/1 55 NON_SYNONYMOUS_CODING MODERATE MISSENSE 1.00 0.00 None None None None None None None
View hp37_1_filt_10x 19 . 55377303 209.77 C T PASS 0/1 56 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View hp37_1_filt_10x 19 . 55377302 215.77 T C PASS 0/1 57 NON_SYNONYMOUS_CODING MODERATE MISSENSE 1.00 0.01 None None None None None None None
View hp37_1_filt_10x 19 rs796782943
dbSNP		 55377280 342.77 G A PASS 0/1 62 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.67 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs779666933
dbSNP		 55377279 343.77 T C PASS 0/1 62 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View hp37_1_filt_10x 19 rs796466301
dbSNP		 55377265 311.77 T C PASS 0/1 60 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.16 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs113800142
dbSNP		 55367311 176.77 G A PASS 0/1 39 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.06949 0.06949 0.06755 0.25 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs112285378
dbSNP		 55365302 364.77 C T PASS 0/1 38 SYNONYMOUS_CODING LOW SILENT 0.06969 0.06969 None None None None None None None
View hp37_1_filt_10x 19 rs654686
dbSNP		 55363704 331.77 G A PASS 0/1 21 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.08 0.02 None None None None None None None
View hp37_1_filt_10x 19 rs652188
dbSNP		 55361942 307.77 G T PASS 0/1 23 SYNONYMOUS_CODING LOW SILENT 0.29513 0.29510 None None None None None None None