SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 10
Number of Genes: 1

Export to: CSV

OR1I1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View hp37_1_filt_10x 19 rs16980313
dbSNP
15198851 185.77 A T PASS 0/1 14 SYNONYMOUS_CODING LOW SILENT 0.18211 0.18210 0.12748 None None None None None None None
View hp37_1_filt_10x 19 rs12975625
dbSNP
15198764 730.77 T C PASS 1/1 31 SYNONYMOUS_CODING LOW SILENT 0.90395 0.90400 0.07720 None None None None None None None
View hp37_1_filt_10x 19 rs16980312
dbSNP
15198751 367.77 T C PASS 0/1 33 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.18171 0.18170 0.12733 0.00 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs8105737
dbSNP
15198631 441.77 A C PASS 0/1 31 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.49082 0.49080 0.42134 0.00 0.93 None None None None None None None
View hp37_1_filt_10x 19 rs73008812
dbSNP
15198606 343.77 C T PASS 0/1 35 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.18211 0.18210 0.12740 0.00 1.00 None None None None None None None
View hp37_1_filt_10x 19 rs8108721
dbSNP
15198507 1116.77 T C PASS 1/1 42 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.67292 0.67290 0.29302 0.89 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs73008811
dbSNP
15198441 787.77 G T PASS 0/1 64 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.18211 0.18210 0.12733 1.00 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs8104843
dbSNP
15198292 1687.77 C G PASS 1/1 66 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.67173 0.67170 0.29394 1.00 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs8105277
dbSNP
15198263 1584.77 A G PASS 1/1 62 SYNONYMOUS_CODING LOW SILENT 0.99980 0.99980 0.00054 None None None None None None None
View hp37_1_filt_10x 19 rs59166286
dbSNP
15198024 490.77 A T PASS 0/1 42 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.18191 0.18190 0.12740 0.70 0.33 None None None None None None None