SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
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Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 45
Number of Genes: 1

Export to: CSV

PLIN4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View hp37_1_filt_10x 19 rs4807597
dbSNP
4513559 565.77 A G PASS 1/1 19 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.96206 0.96210 0.03410 0.87 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs4807596
dbSNP
4513144 505.77 A G PASS 1/1 34 SYNONYMOUS_CODING LOW SILENT 0.91753 0.91750 None None None None None None None
View hp37_1_filt_10x 19 rs4807595
dbSNP
4513143 443.22 C T PASS 0/1 32 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.91174 0.91170 0.22 0.17 None None None None None None None
View hp37_1_filt_10x 19 rs112063407
dbSNP
4512748 553.77 T C PASS 0/1 61 SYNONYMOUS_CODING LOW SILENT 0.11701 0.11700 0.21659 None None None None None None None
View hp37_1_filt_10x 19 rs55901236
dbSNP
4512669 545.77 T C PASS 0/1 54 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.45407 0.45410 0.43092 0.26 0.03 None None None None None None None
View hp37_1_filt_10x 19 rs7259625
dbSNP
4512514 651.77 G C PASS 0/1 61 SYNONYMOUS_CODING LOW SILENT 0.35883 0.35880 0.40686 None None None None None None None
View hp37_1_filt_10x 19 rs7260518
dbSNP
4511955 2174.77 T C PASS 1/1 110 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.87999 0.88000 0.11092 1.00 0.00 0.59 None None None None None None None
View hp37_1_filt_10x 19 rs73920826
dbSNP
4511948 120.77 A G PASS 0/1 117 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.06270 0.06270 0.20 0.01 0.06 None None None None None None None
View hp37_1_filt_10x 19 rs113821070
dbSNP
4511935 182.77 T C PASS 0/1 111 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View hp37_1_filt_10x 19 rs10424401
dbSNP
4511929 1018.77 A G PASS 0/1 104 SYNONYMOUS_CODING LOW SILENT 0.62340 0.62340 None None None None None None None
View hp37_1_filt_10x 19 rs10422025
dbSNP
4511927 1132.77 G A PASS 0/1 104 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.57228 0.57230 1.00 0.00 4.88 None None None None None None None
View hp37_1_filt_10x 19 rs28460600
dbSNP
4511920 366.77 T C PASS 0/1 110 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View hp37_1_filt_10x 19 rs10423606
dbSNP
4511908 615.77 C T PASS 0/1 113 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View hp37_1_filt_10x 19 rs7257142
dbSNP
4511830 1004.77 A G PASS 0/1 110 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View hp37_1_filt_10x 19 rs62115193
dbSNP
4511791 347.77 A C PASS 0/1 100 SYNONYMOUS_CODING LOW SILENT 0.00040 0.30870 None None None None None None None
View hp37_1_filt_10x 19 rs62115192
dbSNP
4511746 242.77 A T PASS 0/1 63 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.02 0.22 None None None None None None None
View hp37_1_filt_10x 19 rs57610751
dbSNP
4511737 528.77 T C PASS 0/1 49 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View hp37_1_filt_10x 19 rs62115190
dbSNP
4511730 895.77 T C PASS 1/1 35 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00040 0.00040 1.00 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs73920825
dbSNP
4511725 863.77 T C PASS 1/1 33 SYNONYMOUS_CODING LOW SILENT 0.87400 0.87400 None None None None None None None
View hp37_1_filt_10x 19 rs759223445
dbSNP
4511680 84.77 A G PASS 0/1 26 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View hp37_1_filt_10x 19 rs200355083
dbSNP
4511679 70.77 C T PASS 0/1 27 NON_SYNONYMOUS_CODING MODERATE MISSENSE 1.00 0.00 3.40 None None None None None None None
View hp37_1_filt_10x 19 rs28546567
dbSNP
4511677 131.77 A G PASS 0/1 26 SYNONYMOUS_CODING LOW SILENT 0.02456 0.02456 None None None None None None None
View hp37_1_filt_10x 19 rs775085816
dbSNP
4511674 77.77 C T PASS 0/1 26 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View hp37_1_filt_10x 19 rs7256387
dbSNP
4511647 644.77 C G PASS 1/1 31 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00579 0.00579 0.17945 1.00 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs78467378
dbSNP
4511599 82.77 C G PASS 0/1 46 SYNONYMOUS_CODING LOW SILENT 0.05312 0.05312 None None None None None None None
View hp37_1_filt_10x 19 rs76022477
dbSNP
4511598 40.77 A G PASS 0/1 45 SYNONYMOUS_CODING LOW SILENT 0.06729 0.06729 None None None None None None None
View hp37_1_filt_10x 19 rs75029810
dbSNP
4511581 63.77 A G PASS 0/1 46 SYNONYMOUS_CODING LOW SILENT 0.26677 0.26680 None None None None None None None
View hp37_1_filt_10x 19 rs78884463
dbSNP
4511580 92.77 C T PASS 0/1 46 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.26677 0.26680 1.00 0.00 2.14 None None None None None None None
View hp37_1_filt_10x 19 rs62115186
dbSNP
4511578 42.77 A G PASS 0/1 48 SYNONYMOUS_CODING LOW SILENT 0.26677 0.26680 None None None None None None None
View hp37_1_filt_10x 19 rs62115185
dbSNP
4511575 127.77 C G PASS 0/1 47 SYNONYMOUS_CODING LOW SILENT 0.26677 0.26680 None None None None None None None
View hp37_1_filt_10x 19 rs368212787
dbSNP
4511560 332.77 G A PASS 0/1 50 SYNONYMOUS_CODING LOW SILENT 0.00020 0.00020 0.00008 None None None None None None None
View hp37_1_filt_10x 19 rs7256712
dbSNP
4511525 1526.77 A G PASS 1/1 60 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.93211 0.93210 0.68 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs10423324
dbSNP
4511491 140.77 A G PASS 0/1 85 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View hp37_1_filt_10x 19 rs7255187
dbSNP
4511453 1789.77 G A PASS 1/1 82 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.89237 0.89240 0.13020 1.00 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs7259721
dbSNP
4511350 1000.84 T A PASS 0/1 68 NON_SYNONYMOUS_CODING MODERATE MISSENSE 1.00 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs74202324
dbSNP
4511341 75.77 T C PASS 0/1 70 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View hp37_1_filt_10x 19 rs10422854
dbSNP
4511284 203.77 A G PASS 0/1 50 SYNONYMOUS_CODING LOW SILENT 0.00679 0.00679 None None None None None None None
View hp37_1_filt_10x 19 rs80238130
dbSNP
4511283 187.77 C T PASS 0/1 50 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00160 0.00160 1.00 0.00 4.21 None None None None None None None
View hp37_1_filt_10x 19 rs7254934
dbSNP
4511281 528.77 G A PASS 0/1 50 SYNONYMOUS_CODING LOW SILENT 0.25619 0.25620 None None None None None None None
View hp37_1_filt_10x 19 rs10422078
dbSNP
4511278 190.77 C T PASS 0/1 50 SYNONYMOUS_CODING LOW SILENT 0.00120 0.00120 None None None None None None None
View hp37_1_filt_10x 19 rs769319984
dbSNP
4511223 48.77 C T PASS 0/1 50 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.42 0.02 -0.31 None None None None None None None
View hp37_1_filt_10x 19 rs758375058
dbSNP
4511213 35.77 C G PASS 0/1 46 NON_SYNONYMOUS_CODING MODERATE MISSENSE 1.00 0.00 3.48 None None None None None None None
View hp37_1_filt_10x 19 rs7255715
dbSNP
4511140 720.77 C G PASS 0/1 73 SYNONYMOUS_CODING LOW SILENT 0.61122 0.61120 0.41916 None None None None None None None
View hp37_1_filt_10x 19 rs7251858
dbSNP
4510560 347.77 C T PASS 0/1 47 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.35463 0.35460 0.29743 0.04 0.26 None None None None None None None
View hp37_1_filt_10x 19 rs8105775
dbSNP
4508945 452.22 A G PASS 1/1 24 SYNONYMOUS_CODING LOW SILENT 0.99840 0.99840 0.00131 None None None None None None None