SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 11
Number of Genes: 1

Export to: CSV

TMPRSS9

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View hp37_1_filt_10x 19 rs7247162
dbSNP
2425196 633.77 G A PASS 0/1 62 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.12640 0.12640 0.06616 0.11 0.24 None None None None None None None
View hp37_1_filt_10x 19 rs735911
dbSNP
2422177 101.77 G A PASS 0/1 12 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.12600 0.12600 0.07135 0.08 0.02 None None None None None None None
View hp37_1_filt_10x 19 rs11084939
dbSNP
2418031 107.77 C T PASS 0/1 14 SYNONYMOUS_CODING LOW SILENT 0.16234 0.16230 0.08965 None None None None None None None
View hp37_1_filt_10x 19 rs10153475
dbSNP
2413961 159.77 G C PASS 0/1 19 SYNONYMOUS_CODING LOW SILENT 0.39317 0.39320 0.36660 None None None None None None None
View hp37_1_filt_10x 19 rs3848635
dbSNP
2410332 471.77 T C PASS 0/1 42 SYNONYMOUS_CODING LOW SILENT 0.39297 0.39300 0.36452 None None None None None None None
View hp37_1_filt_10x 19 rs62120714
dbSNP
2408530 602.77 G A PASS 0/1 69 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.14177 0.14180 0.08734 0.05 0.59 None None None None None None None
View hp37_1_filt_10x 19 rs62120713
dbSNP
2408495 429.77 T G PASS 0/1 57 SYNONYMOUS_CODING LOW SILENT 0.14177 0.14180 0.08696 None None None None None None None
View hp37_1_filt_10x 19 rs62120712
dbSNP
2408486 476.77 T C PASS 0/1 58 SYNONYMOUS_CODING LOW SILENT 0.14177 0.14180 0.08681 3.19 None None None None None None None
View hp37_1_filt_10x 19 rs17685098
dbSNP
2396611 102.77 C T PASS 0/1 14 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.38938 0.38940 0.29445 0.01 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs7252886
dbSNP
2396556 120.77 C T PASS 0/1 15 SYNONYMOUS_CODING LOW SILENT 0.43071 0.43070 0.34238 None None None None None None None
View hp37_1_filt_10x 19 rs891174
dbSNP
2389872 376.77 G C PASS 0/1 41 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.58347 0.58350 0.35092 0.32 0.00 None None None None None None None