SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 10
Number of Genes: 1

Export to: CSV

ZNF577

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View hp37_1_filt_10x 19 rs9807842
dbSNP
52376207 127.77 G A PASS 0/1 16 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.17053 0.17050 0.10326 0.00 0.97 None None None None None None None
View hp37_1_filt_10x 19 rs9807853
dbSNP
52376172 127.77 T A PASS 0/1 23 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.17033 0.17030 0.10326 1.00 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs10407547
dbSNP
52376126 205.77 C T PASS 0/1 34 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.17033 0.17030 0.10295 1.00 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs10407911
dbSNP
52376119 202.77 G A PASS 0/1 37 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.15595 0.15600 0.08158 1.00 0.64 None None None None None None None
View hp37_1_filt_10x 19 rs10407707
dbSNP
52376040 241.77 G A PASS 0/1 36 SYNONYMOUS_CODING LOW SILENT 0.17053 0.17050 0.10318 None None None None None None None
View hp37_1_filt_10x 19 rs8107969
dbSNP
52376952 358.77 T A PASS 0/1 30 SYNONYMOUS_CODING LOW SILENT 0.50639 0.50640 0.47070 None None None None None None None
View hp37_1_filt_10x 19 rs2288868
dbSNP
52376507 154.77 T C PASS 0/1 30 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.50659 0.50660 0.47109 1.00 0.00 None None None None None None None
View hp37_1_filt_10x 19 rs9807843
dbSNP
52376448 55.77 A G PASS 0/1 16 SYNONYMOUS_CODING LOW SILENT 0.17053 0.17050 0.10326 None None None None None None None
View hp37_1_filt_10x 19 rs34295271
dbSNP
52376434 65.77 T C PASS 0/1 15 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.10903 0.10900 0.03483 0.04 0.98 None None None None None None None
View hp37_1_filt_10x 19 rs9807840
dbSNP
52376226 101.77 C T PASS 0/1 12 SYNONYMOUS_CODING LOW SILENT 0.17033 0.17030 0.10318 None None None None None None None