SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 7
Number of Genes: 1

Export to: CSV

HCN2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 19 rs34397648
dbSNP
610273 48191.27 G A PASS 0/1 69 SYNONYMOUS_CODING LOW SILENT 0.09744 0.09744 0.10511 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 rs55659726
dbSNP
603769 17258.94 T C PASS 0/1 167 SYNONYMOUS_CODING LOW SILENT 0.23862 0.23860 0.15569 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 rs56180027
dbSNP
603832 15467.26 C T PASS 0/1 140 SYNONYMOUS_CODING LOW SILENT 0.08107 0.08107 0.07695 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 rs56170955
dbSNP
603826 13108.94 C T PASS 0/1 149 SYNONYMOUS_CODING LOW SILENT 0.23682 0.23680 0.15538 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 rs56131056
dbSNP
603634 12035.94 T C PASS 0/1 88 SYNONYMOUS_CODING LOW SILENT 0.23902 0.23900 0.14830 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 rs56342526
dbSNP
603625 11370.94 T C PASS 0/1 84 SYNONYMOUS_CODING LOW SILENT 0.23602 0.23600 0.14648 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 rs55780677
dbSNP
603874 9214.94 C T PASS 0/1 102 SYNONYMOUS_CODING LOW SILENT 0.23303 0.23300 0.15412 None None None None None None None