SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes:

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 67
Number of Genes: 0

Export to: CSV
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 20 . 18394027 5187.52 G T PASS 0/1 6 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 54735744 12851.63 T C PASS 1/1 38 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 50637249 19716.27 G A PASS 0/1 30 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 44156638 17380.36 G A PASS 0/1 117 MOTIF[MA0139.1:CTCF] MODIFIER 4.07 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 43415759 3365.11 CAA C,... PASS 0/1 8 MOTIF[MA0139.1:CTCF] LOW None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 22073033 378.52 T C PASS 0/1 15 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 18388428 10695.24 G T PASS 0/1 95 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 8389434 291.28 T C PASS 0/1 20 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 7633434 1265.99 C T PASS 0/1 59 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 5892732 1486.59 C T PASS 0/1 71 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 6733534 1298.4 G C PASS 0/1 65 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 4352766 8125.33 C T PASS 0/1 5 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 rs1683561
dbSNP
862024 2529.84 C G PASS 1/1 9 MOTIF[MA0139.1:CTCF] MODIFIER 0.50459 0.50460 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 17 . 81031425 2115.36 A ATCT PASS 0/1 108 MOTIF[MA0139.1:CTCF] LOW None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 17 . 76015640 11797.9 C A PASS 0/1 70 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 17 . 71338855 813.71 CC... C,* PASS 0/2 10 MOTIF[MA0139.1:CTCF] LOW None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 17 . 71338843 752.98 TC... T,* PASS 0/2 10 MOTIF[MA0139.1:CTCF] LOW None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 17 . 71338840 752.04 CT... C,... PASS 0/1 10 MOTIF[MA0139.1:CTCF] LOW None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 17 . 59914784 17836.84 TATC T PASS 0/1 13 MOTIF[MA0139.1:CTCF] LOW None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 17 . 31434012 184.74 G A PASS 0/1 23 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 17 . 21416431 27878.39 A G PASS 0/1 99 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 17 . 11701281 114911.16 T A PASS 1/1 163 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 16 . 89199058 1583.31 A G PASS 0/1 84 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 16 . 50699463 49782.86 G T PASS 0/1 20 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 16 . 48560602 73.64 A G PASS 0/1 5 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 16 . 2000345 8996.97 A G PASS 0/1 66 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 15 . 84642767 37.02 AT A PASS 0/1 4 MOTIF[MA0139.1:CTCF] LOW None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 15 . 68229752 525.87 GG... G PASS 1/1 7 MOTIF[MA0139.1:CTCF] LOW None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 13 . 98797501 26890.5 G A PASS 0/1 49 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 12 . 112911065 62595.86 G A PASS 0/1 93 MOTIF[MA0139.1:CTCF] MODIFIER 0.29 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 12 . 57028944 2101.34 A T PASS 1/1 17 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 12 . 54973676 22.01 C A PASS 0/1 4 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 12 . 52546044 1591.98 C T PASS 1/1 14 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 11 . 65236512 3468.59 G C PASS 0/1 148 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 11 . 3362732 958.27 T C PASS 1/1 5 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 11 . 3129252 2098.97 A G PASS 1/1 20 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 11 rs4078520
dbSNP
723429 20511.36 C T PASS 0/1 51 MOTIF[MA0139.1:CTCF] MODIFIER 0.34165 0.34170 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 10 . 52770861 920.63 C A PASS 0/1 63 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 9 . 135777415 85556.07 G A PASS 0/1 234 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 8 . 144414202 17157.52 C T PASS 1/1 32 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 8 . 130904072 127212.27 A G PASS 0/1 55 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 8 . 10834849 18674.47 C T PASS 0/1 46 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 7 . 139138016 20895.69 A G PASS 0/1 7 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 7 . 103214099 2532.61 A G PASS 0/1 68 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 7 . 103214098 2532.61 C T PASS 0/1 70 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 7 . 128858576 11061.73 TA... TA... PASS 0/1 11 MOTIF[MA0139.1:CTCF] LOW None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 7 . 29649564 826.16 A G PASS 0/1 45 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 7 . 29649560 821.5 C T PASS 0/1 40 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 6 . 52072048 33800.36 T C PASS 0/1 40 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 6 . 31410502 2755.92 C T PASS 0/1 69 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 5 . 177409283 724.03 G C PASS 0/1 13 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 5 . 176085208 527.59 C T PASS 0/1 6 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 3 . 149009158 5263.06 CA C,CAA PASS 0/1 26 MOTIF[MA0139.1:CTCF] LOW None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 3 . 125931596 5863.86 T C PASS 0/1 11 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 3 . 52833272 29258.28 A T PASS 1/1 116 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 3 . 9890653 6042.08 G C PASS 0/1 21 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 2 . 31261468 95312.51 G A PASS 1/1 29 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 1 . 201083434 6272.32 G T PASS 0/1 12 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 1 . 147112734 27091.82 T A PASS 1/1 37 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 1 . 64602955 77984.89 T C PASS 1/1 25 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 1 . 60039906 224588.25 A G PASS 1/1 7 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 1 . 43609556 21536.11 T C PASS 0/1 12 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 1 . 17238495 1398.59 T C PASS 0/1 5 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 1 . 21836660 1633.37 A C PASS 0/1 130 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 1 . 16871068 845.77 G T PASS 0/1 157 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 1 . 12882578 30359.52 G A PASS 1/1 13 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 1 . 1486536 8624.64 T C VQSRTrancheSNP99.90to100.00 0/1 232 MOTIF[MA0139.1:CTCF] MODIFIER None None None None None None None