SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 9
Number of Genes: 1

Export to: CSV

MUC6

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 11 rs79139625
dbSNP
1027174 3874.4 G A PASS 0/1 184 SYNONYMOUS_CODING LOW SILENT 0.01318 0.01318 0.02885 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 11 rs9704308
dbSNP
1019375 100940.41 C T PASS 1/1 171 SYNONYMOUS_CODING LOW SILENT 0.92332 0.92330 0.05615 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 11 rs61869009
dbSNP
1017968 1807.51 T A PASS 1/1 40 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 11 rs61869007
dbSNP
1017941 293.91 G T PASS 1/1 9 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 11 rs57384288
dbSNP
1017773 61.45 G A PASS 0/1 45 SYNONYMOUS_CODING LOW SILENT 0.29673 0.29670 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 11 rs75533660
dbSNP
1017470 117.72 G T PASS 0/1 51 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 11 rs759742128
dbSNP
1017467 100.23 G A VQSRTrancheSNP99.90to100.00 0/1 53 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 11 rs112874139
dbSNP
1017464 84.59 T C VQSRTrancheSNP99.90to100.00 0/1 59 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 11 rs77216712
dbSNP
1017461 74.03 G T PASS 0/1 63 SYNONYMOUS_CODING LOW SILENT None None None None None None None