SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 17
Number of Genes: 1

Export to: CSV

PLIN4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 19 rs756511605
dbSNP
4513132 12282.87 A G PASS 1/1 62 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 4512657 91689.57 T C PASS 0/1 139 SYNONYMOUS_CODING LOW -0.83 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 4512502 71924.15 G C PASS 0/1 210 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 4512397 9911.66 T C PASS 0/1 109 SYNONYMOUS_CODING LOW None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 4511943 272550.42 T C PASS 1/1 199 SYNONYMOUS_CODING LOW -1.28 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 4511917 216603.99 A G PASS 0/1 196 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 4511915 209308.12 G A PASS 0/1 198 SYNONYMOUS_CODING LOW -1.51 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 4511896 121765.73 C T PASS 0/1 224 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 rs542160942
dbSNP
4511818 197013.98 A G PASS 0/1 281 SYNONYMOUS_CODING LOW SILENT 0.00659 0.00659 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 4511635 231056.64 C G PASS 1/1 91 SYNONYMOUS_CODING LOW SILENT -2.07 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 4511513 333427.37 A G PASS 1/1 229 SYNONYMOUS_CODING LOW -3.96 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 4511338 198762.09 T A PASS 0/1 222 SYNONYMOUS_CODING LOW SILENT -1.00 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 rs772434386
dbSNP
4511272 94771.73 A G VQSRTrancheSNP99.90to100.00 0/1 207 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 4511269 56141.69 G A VQSRTrancheSNP99.90to100.00 0/1 204 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 4511266 97040.73 C T VQSRTrancheSNP99.90to100.00 0/1 205 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 4511128 69683.53 C G PASS 0/1 157 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 4508933 46917.83 A G PASS 1/1 92 SYNONYMOUS_CODING LOW SILENT None None None None None None None