SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes at Omim

CRYAA, EYS,
CRYAA Cataract 9, multiple types, 604219 (3)
EYS Retinitis pigmentosa 25, 602772 (3)

Genes at Clinical Genomics Database

CRYAA, EYS,
CRYAA Cataract 9, multiple types
EYS Retitinis pigmentosa 25

Genes at HGMD

Summary

Number of Variants: 830
Number of Genes: 19

Export to: CSV

CNTNAP3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 9 . 39088492 58454.83 T A VQSRTrancheSNP99.90to100.00 0/1 68 STOP_GAINED HIGH NONSENSE 0.25 None None None None None None None

CRYAA

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 21 . 44592359 16591.64 A G VQSRTrancheSNP99.90to100.00 1/1 34 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.02 0.49 None None None None None None None

CXCL16

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 17 . 4638449 8091.32 T C VQSRTrancheSNP99.90to100.00 0/1 43 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.04 0.87 None None None None None None None

EYS

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 6 . 65301537 371.88 G A VQSRTrancheSNP99.90to100.00 0/1 151 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.07 0.96 None None None None None None None

FBXO42

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 1 . 16577417 70179.55 T A VQSRTrancheSNP99.90to100.00 0/1 85 SYNONYMOUS_CODING LOW SILENT -0.42 None None None None None None None

FOXD4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 9 rs2757973
dbSNP
117371 14359.39 C G,* VQSRTrancheSNP99.90to100.00 0/1 14 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.60543 0.60540 1.00 0.00 -2.22 None None None None None None None

FUT5

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 19 . 5866955 98.63 A G VQSRTrancheSNP99.90to100.00 0/1 136 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00 0.93 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 5866725 34507.48 T C VQSRTrancheSNP99.90to100.00 1/1 20 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.51 0.03 -1.68 None None None None None None None

IGKV3D-15

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 2 . 90154172 23297.05 G A VQSRTrancheSNP99.90to100.00 1/1 15 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00 0.73 None None None None None None None

LILRB2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 19 . 54782769 38203.21 A T,G VQSRTrancheSNP99.90to100.00 1/1 9 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.23 0.88 None None None None None None None

MUC6

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 11 rs759742128
dbSNP
1017467 100.23 G A VQSRTrancheSNP99.90to100.00 0/1 53 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 11 rs201054567
dbSNP
1017466 88.86 T C VQSRTrancheSNP99.90to100.00 0/1 56 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00 -1.29 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 11 rs112874139
dbSNP
1017464 84.59 T C VQSRTrancheSNP99.90to100.00 0/1 59 SYNONYMOUS_CODING LOW SILENT None None None None None None None

OR1C1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 1 . 247921162 129767.86 T C VQSRTrancheSNP99.90to100.00 1/1 28 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.33 0.87 -0.84 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 1 . 247921169 38465.02 A G VQSRTrancheSNP99.90to100.00 0/1 26 SYNONYMOUS_CODING LOW SILENT -1.89 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 1 . 247921171 36603.02 C A VQSRTrancheSNP99.90to100.00 0/1 24 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00 1.00 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 1 . 247921678 16545.31 G T VQSRTrancheSNP99.90to100.00 0/1 6 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.02 0.19 0.48 None None None None None None None

OR2T8

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 1 . 248084482 849.61 C T VQSRTrancheSNP99.90to100.00 0/1 78 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.05 0.14 None None None None None None None

PAF1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 19 . 39877838 856.29 G A VQSRTrancheSNP99.90to100.00 0/1 115 None None None None None None None None None None

PLD3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 19 . 40875866 9003.96 T A VQSRTrancheSNP99.90to100.00 0/1 52 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.06 0.07 -0.24 None None None None None None None

PLIN4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 19 . 4511271 96367.73 C T VQSRTrancheSNP99.90to100.00 0/1 205 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00 0.80 -1.65 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 rs772434386
dbSNP
4511272 94771.73 A G VQSRTrancheSNP99.90to100.00 0/1 207 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 4511269 56141.69 G A VQSRTrancheSNP99.90to100.00 0/1 204 SYNONYMOUS_CODING LOW SILENT None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 4511266 97040.73 C T VQSRTrancheSNP99.90to100.00 0/1 205 SYNONYMOUS_CODING LOW SILENT None None None None None None None

SCGB1C1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 11 rs2294081
dbSNP
193863 3561.3 T C VQSRTrancheSNP99.90to100.00 0/1 18 SYNONYMOUS_CODING LOW SILENT 0.75080 0.75080 0.39723 None None None None None None None

SPATA31A1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 9 . 39361469 2794.06 A G VQSRTrancheSNP99.90to100.00 0/1 121 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.34 0.02 1.27 None None None None None None None

ZNF286A

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 17 . 15619445 1300.77 A T VQSRTrancheSNP99.90to100.00 0/1 234 SYNONYMOUS_CODING LOW 1.53 None None None None None None None

ZNF880

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 19 . 52888260 9141.91 G T VQSRTrancheSNP99.90to100.00 0/1 8 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.40 0.01 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 52888247 19155.66 G A VQSRTrancheSNP99.90to100.00 0/1 11 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.04 0.23 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 52888233 17445.44 A G VQSRTrancheSNP99.90to100.00 0/1 13 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.02 0.00 None None None None None None None
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 22 . 38992202 4744.49 G A VQSRTrancheSNP99.90to100.00 1/1 10 None None None -0.26 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 32360665 720.28 A G VQSRTrancheSNP99.90to100.00 0/1 231 None None None -1.54 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 32190867 62249.84 C T VQSRTrancheSNP99.90to100.00 0/1 55 None None None -1.12 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 39875610 28056.25 C G VQSRTrancheSNP99.90to100.00 0/1 22 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 24260999 3885.91 C G VQSRTrancheSNP99.90to100.00 0/1 24 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 24183251 6560.44 G A VQSRTrancheSNP99.90to100.00 0/1 29 None None None -0.47 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 22904994 2789.75 G A,* VQSRTrancheSNP99.90to100.00 0/1 130 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 22904990 2647.6 G T VQSRTrancheSNP99.90to100.00 0/1 133 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 22687254 1788.53 A T VQSRTrancheSNP99.90to100.00 0/1 71 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 21484050 1599.88 C T VQSRTrancheSNP99.90to100.00 1/1 2 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 21477958 1970.08 G T VQSRTrancheSNP99.90to100.00 0/1 43 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 21477952 2046.54 C T VQSRTrancheSNP99.90to100.00 0/1 44 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 21476645 3487.79 G A VQSRTrancheSNP99.90to100.00 0/1 55 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 21475218 9844.79 G A VQSRTrancheSNP99.90to100.00 0/1 142 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 rs138633425
dbSNP
20712609 2224.56 G A VQSRTrancheSNP99.90to100.00 0/1 43 None None None 0.09904 0.09904 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 18544763 490.44 C A VQSRTrancheSNP99.90to100.00 0/1 29 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 16433448 71.63 G T VQSRTrancheSNP99.90to100.00 0/1 57 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 16433447 30387.72 A G VQSRTrancheSNP99.90to100.00 0/1 57 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 16433441 5103.39 C G VQSRTrancheSNP99.90to100.00 0/1 58 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 15722253 8181.19 G A VQSRTrancheSNP99.90to100.00 0/1 33 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 15722028 1275.82 A C VQSRTrancheSNP99.90to100.00 0/1 90 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 15721611 10821.15 A G VQSRTrancheSNP99.90to100.00 0/1 25 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 15721533 19944.83 T C VQSRTrancheSNP99.90to100.00 0/1 79 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 15707978 1723.81 G C VQSRTrancheSNP99.90to100.00 0/1 21 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 22 . 15528960 116.63 A G VQSRTrancheSNP99.90to100.00 0/1 85 None None None -2.05 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 21 . 46000668 104216.21 G A,* VQSRTrancheSNP99.90to100.00 0/1 19 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 21 . 45456733 106.31 G C VQSRTrancheSNP99.90to100.00 0/1 46 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 21 . 44574360 683.57 T C VQSRTrancheSNP99.90to100.00 0/1 110 None None None -1.56 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 21 . 44574233 21492.86 A G VQSRTrancheSNP99.90to100.00 0/1 87 None None None -3.47 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 21 . 10454230 150.42 A T VQSRTrancheSNP99.90to100.00 0/1 134 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 21 . 10415089 1557.65 T C VQSRTrancheSNP99.90to100.00 0/1 20 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 21 . 10491751 48910.65 G A VQSRTrancheSNP99.90to100.00 1/1 6 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 21 . 10491525 104.88 T C VQSRTrancheSNP99.90to100.00 0/1 60 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 20 . 30391200 74300.83 C T VQSRTrancheSNP99.90to100.00 0/1 71 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 56206353 7076.72 T C VQSRTrancheSNP99.90to100.00 0/1 7 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 55772724 1423.25 G A VQSRTrancheSNP99.90to100.00 0/1 102 None None None -1.07 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 55763140 155.77 G A VQSRTrancheSNP99.90to100.00 0/1 105 None None None -1.22 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 54825145 42642.72 T C VQSRTrancheSNP99.90to100.00 0/1 86 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 54783002 40607.73 C T VQSRTrancheSNP99.90to100.00 0/1 47 None None None 1.26 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 54773406 18612.21 G A VQSRTrancheSNP99.90to100.00 1/1 13 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 54766950 8989.58 A T VQSRTrancheSNP99.90to100.00 1/1 16 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 57874380 713.43 G A VQSRTrancheSNP99.90to100.00 0/1 57 None None None -1.51 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 57859289 4256.35 C A VQSRTrancheSNP99.90to100.00 1/1 7 None None None 0.23 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 54747379 3579.46 G A VQSRTrancheSNP99.90to100.00 0/1 92 None None None -0.79 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 54251110 2339.84 T A VQSRTrancheSNP99.90to100.00 1/1 5 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 54099814 3206.97 T G,* VQSRTrancheSNP99.90to100.00 0/2 14 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 53801451 553.16 T C,* VQSRTrancheSNP99.90to100.00 0/1 4 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 52512876 11948.97 G A VQSRTrancheSNP99.90to100.00 0/1 26 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 52491414 3858.54 A G VQSRTrancheSNP99.90to100.00 0/1 119 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 49054315 6356.08 T C VQSRTrancheSNP99.90to100.00 0/1 21 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 49047631 2515.43 T G VQSRTrancheSNP99.90to100.00 0/1 51 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 49033173 220.4 C T VQSRTrancheSNP99.90to100.00 0/1 14 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 49022946 10922.6 G C VQSRTrancheSNP99.90to100.00 0/1 13 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 49022934 12563.69 G A VQSRTrancheSNP99.90to100.00 0/1 16 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 49022862 4984.22 T G VQSRTrancheSNP99.90to100.00 0/1 36 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 49832047 42.63 T G VQSRTrancheSNP99.90to100.00 0/1 63 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 43356103 5030.63 T G VQSRTrancheSNP99.90to100.00 1/1 10 None None None -0.17 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 43356099 5141.45 G A VQSRTrancheSNP99.90to100.00 1/1 10 None None None -0.54 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 43212469 35395.12 A G VQSRTrancheSNP99.90to100.00 0/1 45 None None None -0.09 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 40875742 43810.84 A C VQSRTrancheSNP99.90to100.00 0/1 213 None None None -0.88 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 40848537 3226.07 C G VQSRTrancheSNP99.90to100.00 0/1 32 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 40845278 18.63 T G VQSRTrancheSNP99.90to100.00 0/1 78 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 40843969 4919.94 T A VQSRTrancheSNP99.90to100.00 0/1 101 None None None -0.09 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 39899636 63942.69 A C VQSRTrancheSNP99.90to100.00 0/1 191 None None None -2.15 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 39899634 63785.69 C T VQSRTrancheSNP99.90to100.00 0/1 190 None None None -0.42 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 39894014 80455.17 C T VQSRTrancheSNP99.90to100.00 0/1 252 None None None 1.13 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 39893983 63132.75 A G VQSRTrancheSNP99.90to100.00 0/1 144 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 39889672 7743.64 T C VQSRTrancheSNP99.90to100.00 1/1 2 None None None -3.30 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 39886355 99882.68 C T VQSRTrancheSNP99.90to100.00 0/1 353 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 39886260 137301.83 G T VQSRTrancheSNP99.90to100.00 0/1 274 None None None -1.04 None None None None None None None