SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes:

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 19
Number of Genes: 0

Export to: CSV
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 23 recalibrated filtered postcgp gqfiltered 21 . 10718376 1915.35 T G,C,* PASS 0/3 36 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 35511491 5593.46 CG... C,... PASS 0/3 24 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 35511479 9414.79 C CC... PASS 0/3 24 None None None 0.47 None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 19 . 8969676 12693.24 GA GA... PASS 0/3 28 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 16 . 88714227 85833.33 GG... GG... PASS 0/3 41 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 14 . 67089133 3396.32 CT... TT... PASS 0/3 10 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 13 . 113800924 3843.84 CG... TG... PASS 0/3 36 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 12 . 106106382 4537.77 TAA AA... PASS 0/3 34 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 10 . 22539912 11424.63 GGAGA GG... PASS 0/3 19 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 7 . 100963287 4048.68 ATTT A,... PASS 0/3 37 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 6 . 158783246 1496.01 C G,A,* PASS 0/3 3 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 6 . 44181418 7301.18 AC... A,... PASS 0/3 6 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 6 . 31412384 17184.96 G GC... PASS 0/3 24 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 5 . 36051736 5864.94 GTCCA AT... PASS 0/3 8 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 2 . 156513506 3239.63 GTTT GT... PASS 0/3 13 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 2 . 47806751 14195.76 CTTT C,... PASS 0/3 12 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 1 . 168700908 15763.22 GGTGT GG... PASS 0/3 4 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 1 . 75912674 9206.46 ATTT AT... PASS 0/3 15 None None None None None None None None None None
View 23 recalibrated filtered postcgp gqfiltered 1 . 26282328 3559.38 AG... A,... PASS 0/3 26 None None None None None None None None None None