Name: lb100241 ensemble snp snpeff
Variants: 10772
Novel Variants: 38 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 10772 6793 0/1 3979 1/1
Total Gene-associated SNVs 10772 6793 0/1 3979 1/1

Type Total Variants
MOTIF[MA0024.1:E2F1]1
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0139.1:CTCF]1
NON_SYNONYMOUS_CODING3734
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION94
PROTEIN_INTERACTION_LOCUS23
SPLICE_SITE_REGION5
SPLICE_SITE_REGION+SYNONYMOUS_CODING110
START_GAINED17
START_LOST4
STOP_GAINED25
STOP_LOST9
SYNONYMOUS_CODING4995
SYNONYMOUS_STOP3
None0

Type Total Variants
48
MISSENSE3841
NONSENSE25
SILENT5108
None0

Type Total Variants
HIGH61
LOW5131
MODERATE3828
MODIFIER2
None0

Type Total Variants
PASS10772

Quality Value
Min0.0
Average2151.21171463017
Max15214.8

Read Depth Value
Min2
Average102.24740066839955
Max1161

Type Total Variants
None0
33
22
2|21

Chromossome Total Variants
1934
10409
11683
12497
13236
14370
15399
16448
17634
18198
19631
2790
20230
21110
22236
3653
4462
5516
6813
7484
8367
9417
X252
Y3