Name: recalibrate_180155689_s8_hg38-pass-final
Variants: 56575
Novel Variants: 55737 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 56575 4287 0|1 248 1/2 33349 0/1 17099 1/1 1592 1|1
Total Gene-associated SNVs 56575 4287 0|1 248 1/2 33349 0/1 17099 1/1 1592 1|1

Type Total Variants
354
CODON_CHANGE_PLUS_CODON_DELETION8
CODON_CHANGE_PLUS_CODON_INSERTION10
CODON_CHANGE_PLUS_CODON_INSERTION+SPLICE_SITE_REGION1
CODON_DELETION5
CODON_INSERTION10
FRAME_SHIFT95
FRAME_SHIFT+SPLICE_SITE_REGION6
FRAME_SHIFT+STOP_GAINED1
MOTIF[MA0003.1:Ap2alpha]1
MOTIF[MA0014.1:Pax5]1
MOTIF[MA0016.1:RXRA]1
MOTIF[MA0035.2:Gata1]2
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0047.2:FOXA2]1
MOTIF[MA0058.1:Max]4
MOTIF[MA0059.1:Cmyc]1
MOTIF[MA0062.2:Gabp]7
MOTIF[MA0065.1:PPARG]1
MOTIF[MA0079.2:SP1]1
MOTIF[MA0080.2:PU1]1
MOTIF[MA0093.1:USF1]4
MOTIF[MA0095.1:Yy1]1
MOTIF[MA0099.2:AP1]3
MOTIF[MA0114.1:HNF4A]7
MOTIF[MA0138.2:Nrsf]6
MOTIF[MA0139.1:CTCF]28
MOTIF[MA0147.1:Cmyc]3
MOTIF[MA0148.1:FOXA1]3
MOTIF[MA0154.1:EBF]4
MOTIF[MA0162.1:Egr1]3
NON_SYNONYMOUS_CODING912
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION29
PROTEIN_INTERACTION_LOCUS9
SPLICE_SITE_REGION5
SPLICE_SITE_REGION+SYNONYMOUS_CODING17
START_GAINED28
START_LOST2
STOP_GAINED34
STOP_GAINED+SPLICE_SITE_REGION4
STOP_LOST3
SYNONYMOUS_CODING807
SYNONYMOUS_START2
None0

Type Total Variants
1046
MISSENSE946
NONSENSE38
SILENT396
None0

Type Total Variants
HIGH154
LOW887
MODERATE975
MODIFIER410
None0

Type Total Variants
PASS56575

Quality Value
Min30.59
Average431.597644012576
Max20058.03

Read Depth Value
Min0
Average22.514555899248784
Max616

Type Total Variants
None0
2|2|2|2|31
-55
5|23
3|2|21
2393
5|5|5|5|2|2|2|2|2|2|21
2|2|2|2|21
2|36
2|2|3|2|2|31
2|54
2|2|2|23
65
44
2|3|22
2|2|25
3|24
5|41
5|4|51
2|266
5|51
519
-62
3106
2|2|3|2|21
2|5|51

Chromossome Total Variants
15513
102428
113601
122848
131308
141871
152063
162086
172824
181021
193729
24021
201445
21852
221256
33288
42507
52670
62342
72855
82080
92362
M9
X1568
Y28