Name: mm190511sso
Variants: 148929
Novel Variants: 4118 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 148929 435 1/2 91895 0/1 56599 1/1
Total Gene-associated SNVs 148929 435 1/2 91895 0/1 56599 1/1

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION127
CODON_CHANGE_PLUS_CODON_INSERTION65
CODON_DELETION51
CODON_DELETION+SPLICE_SITE_REGION2
CODON_INSERTION65
CODON_INSERTION+SPLICE_SITE_REGION1
FRAME_SHIFT186
FRAME_SHIFT+SPLICE_SITE_REGION43
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED5
FRAME_SHIFT+STOP_LOST3
MOTIF_DELETED3
MOTIF[MA0003.1:Ap2alpha]36
MOTIF[MA0014.1:Pax5]3
MOTIF[MA0016.1:RXRA]6
MOTIF[MA0024.1:E2F1]4
MOTIF[MA0036.1:Gata2]2
MOTIF[MA0047.1:FOXA2]1
MOTIF[MA0047.2:FOXA2]1
MOTIF[MA0058.1:Max]18
MOTIF[MA0059.1:Cmyc]6
MOTIF[MA0062.1:Gabp]9
MOTIF[MA0062.2:Gabp]38
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]8
MOTIF[MA0079.2:SP1]24
MOTIF[MA0080.1:PU1]2
MOTIF[MA0080.2:PU1]6
MOTIF[MA0083.1:Srf]3
MOTIF[MA0093.1:USF1]3
MOTIF[MA0095.1:Yy1]11
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0099.2:AP1]2
MOTIF[MA0114.1:HNF4A]10
MOTIF[MA0115.1:RNR1H2]1
MOTIF[MA0138.2:Nrsf]10
MOTIF[MA0139.1:CTCF]104
MOTIF[MA0140.1:Tal1]1
MOTIF[MA0147.1:Cmyc]15
MOTIF[MA0148.1:FOXA1]1
MOTIF[MA0154.1:EBF]3
MOTIF[MA0159.1:RXR]1
MOTIF[MA0162.1:Egr1]51
NON_SYNONYMOUS_CODING13660
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION298
NON_SYNONYMOUS_START2
PROTEIN_INTERACTION_LOCUS44
SPLICE_SITE_REGION47
SPLICE_SITE_REGION+SYNONYMOUS_CODING274
START_GAINED350
START_LOST13
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED135
STOP_GAINED+CODON_CHANGE_PLUS_CODON_DELETION1
STOP_GAINED+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION2
STOP_LOST25
STOP_LOST+SPLICE_SITE_REGION2
SYNONYMOUS_CODING13566
SYNONYMOUS_STOP13
TRANSCRIPT1
None0

Type Total Variants
1382
MISSENSE14000
NONSENSE137
SILENT13853
None0

Type Total Variants
HIGH465
LOW14419
MODERATE14269
MODIFIER219
None0

Type Total Variants
.138419
LowQual10510

Quality Value
Min10.17
Average983.079913582766
Max65422.19

Read Depth Value
Min1
Average73.39352980279193
Max6253

Type Total Variants
None0
32
23
2|21

Chromossome Total Variants
114506
106116
118395
127477
132605
145221
155444
167031
177896
182558
199937
210744
204041
212228
224372
38160
45740
56310
68654
77550
85173
96212
X2304
Y255