Name: mm160246mm
Variants: 46308
Novel Variants: 296 (Not in latest DbSNP Build)
| Type | Total Variants |
|---|---|
| CODON_CHANGE_PLUS_CODON_DELETION | 64 |
| CODON_CHANGE_PLUS_CODON_INSERTION | 43 |
| CODON_DELETION | 29 |
| CODON_INSERTION | 45 |
| CODON_INSERTION+SPLICE_SITE_REGION | 1 |
| FRAME_SHIFT | 122 |
| FRAME_SHIFT+SPLICE_SITE_REGION | 37 |
| FRAME_SHIFT+START_LOST | 3 |
| FRAME_SHIFT+STOP_GAINED | 3 |
| FRAME_SHIFT+STOP_LOST | 3 |
| MOTIF[MA0003.1:Ap2alpha] | 4 |
| MOTIF[MA0014.1:Pax5] | 2 |
| MOTIF[MA0024.1:E2F1] | 3 |
| MOTIF[MA0035.2:Gata1] | 1 |
| MOTIF[MA0058.1:Max] | 4 |
| MOTIF[MA0062.1:Gabp] | 1 |
| MOTIF[MA0062.2:Gabp] | 14 |
| MOTIF[MA0079.1:SP1] | 2 |
| MOTIF[MA0079.2:SP1] | 4 |
| MOTIF[MA0080.2:PU1] | 1 |
| MOTIF[MA0095.1:Yy1] | 5 |
| MOTIF[MA0099.1:Cfos] | 1 |
| MOTIF[MA0114.1:HNF4A] | 1 |
| MOTIF[MA0138.2:Nrsf] | 1 |
| MOTIF[MA0139.1:CTCF] | 23 |
| MOTIF[MA0147.1:Cmyc] | 1 |
| MOTIF[MA0148.1:FOXA1] | 1 |
| MOTIF[MA0162.1:Egr1] | 3 |
| NON_SYNONYMOUS_CODING | 9724 |
| NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION | 187 |
| NON_SYNONYMOUS_START | 1 |
| PROTEIN_INTERACTION_LOCUS | 46 |
| SPLICE_SITE_REGION | 14 |
| SPLICE_SITE_REGION+SYNONYMOUS_CODING | 198 |
| START_GAINED | 98 |
| START_LOST | 8 |
| START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION | 1 |
| START_LOST+CODON_INSERTION | 1 |
| STOP_GAINED | 89 |
| STOP_GAINED+SPLICE_SITE_REGION | 3 |
| STOP_LOST | 21 |
| STOP_LOST+SPLICE_SITE_REGION | 3 |
| SYNONYMOUS_CODING | 10378 |
| SYNONYMOUS_STOP | 5 |
| None | 0 |
| Quality | Value |
|---|---|
| Min | 10.2 |
| Average | 1301.46387211816 |
| Max | 65422.19 |
| Read Depth | Value |
|---|---|
| Min | 1 |
| Average | 69.83341971149693 |
| Max | 1000 |
Mendel,MD