Name: mm170237jc
Variants: 135750
Novel Variants: 1947 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 135750 259 1/2 83370 0/1 52121 1/1
Total Gene-associated SNVs 135750 259 1/2 83370 0/1 52121 1/1

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION90
CODON_CHANGE_PLUS_CODON_DELETION+SPLICE_SITE_REGION1
CODON_CHANGE_PLUS_CODON_INSERTION57
CODON_DELETION38
CODON_DELETION+SPLICE_SITE_REGION1
CODON_INSERTION53
CODON_INSERTION+SPLICE_SITE_REGION1
FRAME_SHIFT150
FRAME_SHIFT+SPLICE_SITE_REGION41
FRAME_SHIFT+START_LOST3
FRAME_SHIFT+STOP_GAINED2
FRAME_SHIFT+STOP_LOST4
MOTIF[MA0003.1:Ap2alpha]19
MOTIF[MA0014.1:Pax5]5
MOTIF[MA0016.1:RXRA]3
MOTIF[MA0024.1:E2F1]7
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0058.1:Max]20
MOTIF[MA0059.1:Cmyc]4
MOTIF[MA0062.1:Gabp]5
MOTIF[MA0062.2:Gabp]32
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]10
MOTIF[MA0079.2:SP1]20
MOTIF[MA0080.1:PU1]3
MOTIF[MA0080.2:PU1]3
MOTIF[MA0093.1:USF1]4
MOTIF[MA0095.1:Yy1]11
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0099.2:AP1]1
MOTIF[MA0114.1:HNF4A]7
MOTIF[MA0138.2:Nrsf]5
MOTIF[MA0139.1:CTCF]94
MOTIF[MA0147.1:Cmyc]11
MOTIF[MA0148.1:FOXA1]2
MOTIF[MA0154.1:EBF]4
MOTIF[MA0159.1:RXR]2
MOTIF[MA0162.1:Egr1]36
NON_SYNONYMOUS_CODING11586
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION255
NON_SYNONYMOUS_START1
PROTEIN_INTERACTION_LOCUS42
SPLICE_SITE_REGION33
SPLICE_SITE_REGION+SYNONYMOUS_CODING256
START_GAINED309
START_LOST11
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED94
STOP_GAINED+SPLICE_SITE_REGION2
STOP_LOST26
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING12238
SYNONYMOUS_STOP12
TRANSCRIPT1
None0

Type Total Variants
1139
MISSENSE11882
NONSENSE96
SILENT12506
None0

Type Total Variants
HIGH379
LOW12969
MODERATE12082
MODIFIER193
None0

Type Total Variants
.130445
LowQual5305

Quality Value
Min10.2
Average946.427391454076
Max65449.29

Read Depth Value
Min1
Average50.27163904235727
Max5108

Type Total Variants
None0
32
22

Chromossome Total Variants
112622
105926
118249
127747
132811
144894
154547
165776
177209
182280
198013
29746
203462
212146
222951
37741
46026
55961
67754
77118
84961
95653
X2067
Y90