Name: mm170233ac
Variants: 135703
Novel Variants: 1967 (Not in latest DbSNP Build)
Type | Total Variants |
---|---|
CODON_CHANGE_PLUS_CODON_DELETION | 95 |
CODON_CHANGE_PLUS_CODON_DELETION+SPLICE_SITE_REGION | 1 |
CODON_CHANGE_PLUS_CODON_INSERTION | 62 |
CODON_DELETION | 36 |
CODON_INSERTION | 50 |
CODON_INSERTION+SPLICE_SITE_REGION | 1 |
FRAME_SHIFT | 152 |
FRAME_SHIFT+SPLICE_SITE_REGION | 42 |
FRAME_SHIFT+START_LOST | 4 |
FRAME_SHIFT+STOP_GAINED | 3 |
FRAME_SHIFT+STOP_LOST | 4 |
MOTIF_DELETED | 1 |
MOTIF[MA0003.1:Ap2alpha] | 22 |
MOTIF[MA0014.1:Pax5] | 4 |
MOTIF[MA0016.1:RXRA] | 1 |
MOTIF[MA0024.1:E2F1] | 6 |
MOTIF[MA0035.2:Gata1] | 1 |
MOTIF[MA0036.1:Gata2] | 1 |
MOTIF[MA0058.1:Max] | 16 |
MOTIF[MA0059.1:Cmyc] | 4 |
MOTIF[MA0062.1:Gabp] | 7 |
MOTIF[MA0062.2:Gabp] | 31 |
MOTIF[MA0065.1:PPARG] | 3 |
MOTIF[MA0079.1:SP1] | 7 |
MOTIF[MA0079.2:SP1] | 21 |
MOTIF[MA0080.1:PU1] | 4 |
MOTIF[MA0080.2:PU1] | 4 |
MOTIF[MA0083.1:Srf] | 1 |
MOTIF[MA0093.1:USF1] | 5 |
MOTIF[MA0095.1:Yy1] | 10 |
MOTIF[MA0099.1:Cfos] | 2 |
MOTIF[MA0099.2:AP1] | 2 |
MOTIF[MA0114.1:HNF4A] | 7 |
MOTIF[MA0138.1:Nrsf] | 1 |
MOTIF[MA0138.2:Nrsf] | 8 |
MOTIF[MA0139.1:CTCF] | 80 |
MOTIF[MA0147.1:Cmyc] | 12 |
MOTIF[MA0148.1:FOXA1] | 1 |
MOTIF[MA0154.1:EBF] | 4 |
MOTIF[MA0159.1:RXR] | 3 |
MOTIF[MA0162.1:Egr1] | 35 |
NON_SYNONYMOUS_CODING | 11533 |
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION | 240 |
NON_SYNONYMOUS_START | 2 |
PROTEIN_INTERACTION_LOCUS | 51 |
SPLICE_SITE_REGION | 38 |
SPLICE_SITE_REGION+SYNONYMOUS_CODING | 255 |
START_GAINED | 336 |
START_LOST | 11 |
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION | 1 |
STOP_GAINED | 105 |
STOP_GAINED+SPLICE_SITE_REGION | 3 |
STOP_LOST | 27 |
STOP_LOST+SPLICE_SITE_REGION | 2 |
SYNONYMOUS_CODING | 11880 |
SYNONYMOUS_STOP | 9 |
TRANSCRIPT | 1 |
None | 0 |
Quality | Value |
---|---|
Min | 10.17 |
Average | 993.50192707519 |
Max | 65449.29 |
Read Depth | Value |
---|---|
Min | 1 |
Average | 51.622012777904686 |
Max | 4810 |