Name: mm170233ac
Variants: 135703
Novel Variants: 1967 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 135703 294 1/2 80176 0/1 55233 1/1
Total Gene-associated SNVs 135703 294 1/2 80176 0/1 55233 1/1

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION95
CODON_CHANGE_PLUS_CODON_DELETION+SPLICE_SITE_REGION1
CODON_CHANGE_PLUS_CODON_INSERTION62
CODON_DELETION36
CODON_INSERTION50
CODON_INSERTION+SPLICE_SITE_REGION1
FRAME_SHIFT152
FRAME_SHIFT+SPLICE_SITE_REGION42
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED3
FRAME_SHIFT+STOP_LOST4
MOTIF_DELETED1
MOTIF[MA0003.1:Ap2alpha]22
MOTIF[MA0014.1:Pax5]4
MOTIF[MA0016.1:RXRA]1
MOTIF[MA0024.1:E2F1]6
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0058.1:Max]16
MOTIF[MA0059.1:Cmyc]4
MOTIF[MA0062.1:Gabp]7
MOTIF[MA0062.2:Gabp]31
MOTIF[MA0065.1:PPARG]3
MOTIF[MA0079.1:SP1]7
MOTIF[MA0079.2:SP1]21
MOTIF[MA0080.1:PU1]4
MOTIF[MA0080.2:PU1]4
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]5
MOTIF[MA0095.1:Yy1]10
MOTIF[MA0099.1:Cfos]2
MOTIF[MA0099.2:AP1]2
MOTIF[MA0114.1:HNF4A]7
MOTIF[MA0138.1:Nrsf]1
MOTIF[MA0138.2:Nrsf]8
MOTIF[MA0139.1:CTCF]80
MOTIF[MA0147.1:Cmyc]12
MOTIF[MA0148.1:FOXA1]1
MOTIF[MA0154.1:EBF]4
MOTIF[MA0159.1:RXR]3
MOTIF[MA0162.1:Egr1]35
NON_SYNONYMOUS_CODING11533
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION240
NON_SYNONYMOUS_START2
PROTEIN_INTERACTION_LOCUS51
SPLICE_SITE_REGION38
SPLICE_SITE_REGION+SYNONYMOUS_CODING255
START_GAINED336
START_LOST11
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED105
STOP_GAINED+SPLICE_SITE_REGION3
STOP_LOST27
STOP_LOST+SPLICE_SITE_REGION2
SYNONYMOUS_CODING11880
SYNONYMOUS_STOP9
TRANSCRIPT1
None0

Type Total Variants
1181
MISSENSE11815
NONSENSE108
SILENT12144
None0

Type Total Variants
HIGH405
LOW12643
MODERATE12018
MODIFIER182
None0

Type Total Variants
.130699
LowQual5004

Quality Value
Min10.17
Average993.50192707519
Max65449.29

Read Depth Value
Min1
Average51.622012777904686
Max4810

Type Total Variants
None0
32
51
23
2|21

Chromossome Total Variants
112908
105915
117959
127234
132422
144821
154757
165966
177522
182271
198701
29814
203288
212135
223321
37615
46041
55787
68428
77107
84733
95267
X1643
Y48